A new 3D grid method for accurate electronic structure calculation of polyatomic molecules: The Voronoi-cell finite difference method

POSTER

Abstract

We introduce a new computational method on \emph{unstructured} grids in the three-dimensional (3D) spaces to investigate the electronic structure of polyatomic molecules. The Voronoi-cell finite difference (VFD) method realizes a simple discrete Laplacian operator on \emph{unstructured} grids based on Voronoi cells and their natural neighbors. The feature of \emph{unstructured} grids enables us to choose intuitive pictures for an optimal molecular grid system. The new VFD method achieves highly adaptability by the Voronoi-cell diagram and yet simplicity by the finite difference scheme. It has no limitation in local refinement of grids in the vicinity of nuclear positions and provides an explicit expression at each grid without any integration. This method augmented by \emph{unstructured} molecular grids is suitable for solving the Schr\"odinger equation with the realistic 3D Coulomb potentials regardless of symmetry of molecules. For numerical examples, we test accuracies for electronic structures of one-electron polyatomic systems: linear H$_2^+$ and triangular H$_3^{++}$. We also extend VFD to the density functional theory (DFT) for many-electron polyatomic molecules.

Authors

  • Sang-Kil Son

    Department of Chemistry, University of Kansas

  • Shih-I Chu

    Center for Theoretical Sciences, Dept. of Physics, National Taiwan University, Taipei, Taiwan, University of Kansas, Dept. of Chemistry, Univ. of Kansas, Lawrence, KS 66045 USA, Department of Chemistry, University of Kansas, Department of Chemistry, University of Kansas, Lawrence, KS 66045