Protein molecular deformation and protein crystal damage induced by shock waves traveling in liquid microjets
ORAL
Abstract
Femtosecond crystallography studies done at X-ray laser facilities are an emerging method that provides new insights into the biological function of complex proteins. Second-generation X-ray lasers enable acquisition rates exceeding a million diffraction images per second, and to supply fresh protein crystals at these rates, they must be carried by high-velocity liquid microjets. These microjets also guide the shock waves generated by previous X-ray pulses. The effect of shocks generated by previous X-ray pulses on lysozyme and carboxyhemoglobin crystals was investigated experimentally. The molecular structure of the lysozyme did not change after shocks with amplitudes up to 140 MPa, but the quality of diffraction data decreased for shocks above 30−45 MPa, indicating crystal damage. In contrast, the molecular structure of carboxyhemoglobin changed after shocks ranging from 35 to 70 MPa. These results suggest the shocks induced brittle failure in lysozyme but plastic deformation in carboxyhemoglobin, and were used to estimate under what conditions X-ray laser crystallography data is likely to be affected by such shocks.
*Startup funds, Rutgers University-NewarkU. S. Department of Energy, Office of Science, Chemical Sciences, Geosciences, and Biosciences DivisionNational Institutes of Health, P41GM103393, formerly P41RR001209Use of the LCLS is supported by the U. S. Department of Energy, Office of Science, Office of Basic Energy Sciences under Contract No. DE-AC02-76SF00515
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Publication:1. M. L. Grünbein, L. Foucar, A. Gorel, M. Hilpert, M. Kloos, K. Nass, G. Nass Kovacs, C. M. Roome, R. L. Shoeman, M. Stricker, S. Carbajo, W. Colocho, S. Gilevich, M. Hunter, J. Lewandowski, A. Lutman, J. E. Koglin, T. J. Lane, T. van Driel, J. Sheppard, S. L. Vetter, J. L. Turner, R. B. Doak, T. R. M. Barends, S. Boutet, A. L. Aquila, F. -J. Decker, I. Schlichting and C. A. Stan. Observation of shock-induced protein crystal damage during megahertz serial femtosecond crystallography, Phys. Rev. Research 3, 030146, 2021.
2. M. L. Grünbein, A. Gorel, L. Foucar, S. Carbajo, W. Colocho, S. Gilevich, E. Hartmann, M. Hilpert, M. Hunter, M. Kloos, J. E. Koglin, T. J. Lane, J. Lewandowski, A. Lutman, K. Nass, G. Nass Kovacs, C. M. Roome, J. Sheppard, R. L. Shoeman, M. Stricker, T. van Driel, S. L. Vetter, R. B. Doak, S. Boutet, A. Aquila, F. -J. Decker, T. R. M. Barends, C. A. Stan and I. Schlichting. Effect of X-ray free-electron laser-induced shockwaves on haemoglobin microcrystals delivered in a liquid jet, Nat. Commun. 12, 1672, 2021.
Presenters
Claudiu A Stan
Department of Physics, Rutgers University Newark, Newark, New Jersey 07102, USA
Rutgers University - Newark
Authors
Claudiu A Stan
Department of Physics, Rutgers University Newark, Newark, New Jersey 07102, USA
Rutgers University - Newark
Marie L Grünbein
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Lutz Foucar
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Alexander Gorel
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Mario Hilpert
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Marco Kloos
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Karol Nass
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Gabriela Nass Kovacs
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Christopher M Roome
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Robert L Shoeman
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Miriam Stricker
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Sergio Carbajo
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
William Colocho
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
Sasha Gilevich
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
Mark Hunter
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
Jim Lewandowski
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
Alberto Lutman
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
Jason E Koglin
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
Thomas J Lane
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
Tim van Driel
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
John Sheppard
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
Sharon L Vetter
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
James Turner
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
R. Bruce Doak
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Thomas R. M. Barends
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany
Sebastien Boutet
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
Andrew L Aquila
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
Franz J Decker
SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
Ilme Schlichting
Max Planck Institute for Medical Research, Jahnstrasse 29, D-69120 Heidelberg, Germany