Dynamics of polymer expansion out of spherical capsids

ORAL

Abstract

We present simulations investigating the dynamics of expanding flexible polymers while ejecting from a spherical capsid. Recent theoretical models predict that for a good solvent the number of ejected beads, $N$, follows a power law with time, $N \sim (1 + at)^{-1}$ ($a$ is a constant). Our simulation results agree with these predictions for shorter ejection times. However, we find that at larger times the remaining beads eject at a faster rate than predicted. A possible explanation is that models neglect of the polymer's entropy outside the capsid, which can contribute an additional force that aids in pulling the beads remaining in the capsid outside.

Authors

  • Issam Ali

    Sultan Qaboos University