Physics of Genome Organization: From DNA to Chromatin I

FOCUS · K49

Presentations

  • Nucleosome unwrapping may be easier than you think

    Invited

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    Presenters

    • Ralf Bundschuh

      Departments of Physics, Chemistry&Biochemistry, and Division of Hematology, Ohio State Univ - Columbus

    Authors

    • Ralf Bundschuh

      Departments of Physics, Chemistry&Biochemistry, and Division of Hematology, Ohio State Univ - Columbus

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  • Nuclear Architecture Controls the Timescales of Genomic Interactions

    ORAL

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    Presenters

    • Yaojun Zhang

      Princeton Center for Theoretical Science, Princeton University, Princeton University

    Authors

    • Yaojun Zhang

      Princeton Center for Theoretical Science, Princeton University, Princeton University

    • Nimish Khanna

      Molecular Biology, University of California San Diego

    • Olga Dudko

      Physics, University of California San Diego

    • Cornelis Murre

      Molecular Biology, University of California San Diego

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  • Defect-Facilitated Buckling in Supercoiled DNA

    ORAL

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    Presenters

    • Sumitabha Brahmachari

      Northwestern University

    Authors

    • Sumitabha Brahmachari

      Northwestern University

    • Andrew Dittmore

      National Institutes of Health

    • Yasuharu Takagi

      National Institutes of Health

    • Keir Neuman

      Natl Inst Health - NIH, National Institutes of Health

    • John Marko

      Biomolecular Sci, Northwestern University, Physics Dept., Biomolecular Sci., Northwestern University, Northwestern University

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  • Uncovering the Relation between Inter-Nucleosome Energetics and Supramolecular Chromatin Structure

    ORAL

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    Presenters

    • Joshua Moller

      Univ of Chicago, University of Chicago

    Authors

    • Joshua Moller

      Univ of Chicago, University of Chicago

    • Joshua Lequieu

      Univ of Chicago, University of California Santa Barbara

    • Juan De Pablo

      Institute for Molecular Engineering, The University of Chicago, Institute for Molecular Engineering, Univ of Chicago, Institute for molecular engineering, The University of Chicago, University of Chicago, Univ of Chicago, Institute for Molecular Engineering, University of Chicago, The Institute for Molecular Engineering, The University of Chicago, Institute of Molecular Engineering, University of Chicago

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  • Active hydrodynamics of interphase chromatin: coarse-grained modeling and simulations

    ORAL

    –

    Presenters

    • David Saintillan

      Department of Mechanical and Aerospace Engineering, Univ of California - San Diego, University of California San Diego

    Authors

    • David Saintillan

      Department of Mechanical and Aerospace Engineering, Univ of California - San Diego, University of California San Diego

    • Achal Mahajan

      University of California San Diego

    • Michael Shelley

      Center for Computational Biology, Simons Foundation; Courant Institute of Mathematical Science, New York University, New York University, Courant Institute/Flatiron Institute, Center for Computational Biology, Flatiron Institute, Simons Foundation, Flatiron Institute, Simons Foundation, Center for Computational Biology, Flatiron Institute, Flatiron Institute, CCB, Flatiron Institute

    • Alexandra Zidovska

      Center for Soft Matter Research, Department of Physics, New York University, New York University

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  • Dynamics of Stretched Single DNA and Native Chromatin in Nanoslits

    ORAL

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    Presenters

    • JiaWei Yeh

      Inst of Physics Academia Sinica

    Authors

    • JiaWei Yeh

      Inst of Physics Academia Sinica

    • Kylan Szeto

      Cornell University

    • Chia-Fu Chou

      Inst of Physics Academia Sinica

    • Alexey Feofanov

      University of Innsbruck, University of Waterloo, Korea University, Okinawa Institute of Science and Technology, University of California - Los Angeles, The University of Manchester, University of Puerto Rico at Humacao, Department of Physics & Electronics, University of Puerto Rico at Cayey, Department of Mathematics-Physics, Oak Ridge National Lab, Max Planck Institute for Chemical Physics of Solids, Department of Physics, University of Puerto Rico, Electrical Engineering Department, University of Arkansas, Department of Physics, University of Arkansas, School of Basic Sciences at IIT Mandi, H.P., India, Computational Biology, Flatiron Institute, Physics, Hong Kong Univ of Sci & Tech, University of California, Los Angeles, Max Planck Inst, Institute for Theoretical Physics, University of Cologne, Department of Physics, Simon Fraser University, Deutsches Elektronen Synchrotron (DESY), Institut fur Theoretische Physik, Univerisitat zu Berlin, Institut fur Physik, Univerisitat zu Berlin, Plymouth State University, The Graduate Center, CUNY, Nordita, KTH Royal Institute of Technology and Stockholm University, Univ of Connecticut - Storrs, Univ Stuttgart, University of Chicago, University of Texas at El Paso, University of Tulsa, California Institute of Technology, Georgia Institute of Technology, Universite Paris Diderot, Laboratoire MPQ, Universita di Trento, BEC Center, ICTP Trieste, Universita di Pisa, Inst of Physics Academia Sinica, Batelle, Cal State Univ- San Bernardino, Chemical Engineering, University of Michigan, QCD Labs, Department of Applied Physics, Aalto University, Yale University, MIT, Harvard Univ, Chemical & Environmental Engineering, University of California, Riverside, University of Frankfurt, Germany, University of Hamburg, Germany, Naval Research Laboratory, Cornell Univ, National Institute for Material Science, U.S. Naval Research Laboratory, Washington DC, Materials Engineering, University of Santa Barbara, Institute of Physics, Chinese Academy of Sciences, Univ of Texas, Arlington, MIT Lincoln Laboratory, University of Sydney, Iowa State University, Purdue University, Kansas State University, University of Maryland, John Hopkins University, Universite de Sherbrooke, Physics, Konkuk University, Perimeter Institute, University of Waterloo, D-Wave, San Jose State University, Université de Sherbrooke, Institute of Physics, EPFL - Lausanne​

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  • A Unified Computational Framework for Modeling Genome-wide Nucleosome Landscape

    ORAL

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    Presenters

    • Hu Jin

      Department of Physics and Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign

    Authors

    • Hu Jin

      Department of Physics and Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign

    • Alex Finnegan

      Physics, University of Illinois, Urbana-Champaign, Department of Physics and Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign

    • Jun Song

      Department of Physics and Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign

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  • Structure and Dynamics of Histone-DNA Phase Separated Liquid Droplets

    ORAL

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    Presenters

    • Anisha Shakya

      Center for Soft and Living Matter, Institute for Basic Science, Center for Soft and Living Matter, Institute of Basic Science, Ulsan Natl Inst of Sci & Tech

    Authors

    • Anisha Shakya

      Center for Soft and Living Matter, Institute for Basic Science, Center for Soft and Living Matter, Institute of Basic Science, Ulsan Natl Inst of Sci & Tech

    • John King

      Center for Soft and Living Matter, Institute for Basic Science, Center for Soft and Living Matter, Institute of Basic Science, Ulsan Natl Inst of Sci & Tech

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