Systems Biology and Stochasticity in Biological Networks

Presentations

• The effects of the circadian clock on cell cycle regulation in cyanobacteria

  ORAL

  March 6, 2019, 2:30 PM – March 6, 2019, 2:42 PM

  Presenters

  • Po-Yi Ho

    Harvard University

  Authors

  • Po-Yi Ho

    Harvard University

  • Ariel Amir

    Harvard University, School of Engineering and Applied Sciences, Harvard University, School of Engineering and Applied Science, Harvard University

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• Molecular search for a target with a conformational change: First passage time approach

  ORAL

  March 6, 2019, 2:42 PM – March 6, 2019, 2:54 PM

  Presenters

  • Jaeoh Shin

    Rice University

  Authors

  • Jaeoh Shin

    Rice University

  • Anatoly Boris Kolomeisky

    Chemistry, Rice University, Rice University, Department of Chemistry and Centre for Theoretical Biological Physics, Rice University

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• Timing in single cells: fundamental limits and mechanisms for noise suppression

  ORAL

  March 6, 2019, 2:54 PM – March 6, 2019, 3:06 PM

  Presenters

  • Ruoshi Yuan

    Harvard Medical School

  Authors

  • Ruoshi Yuan

    Harvard Medical School

  • Jiawei Yan

    Harvard Medical School

  • Glenn Vinnicombe

    University of Cambridge

  • Johan Paulsson

    Harvard Medical School

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• Non-steady-state dynamics and growth optimization of scalable flux networks

  ORAL

  March 6, 2019, 3:06 PM – March 6, 2019, 3:18 PM

  Presenters

  • Wei-Hsiang Lin

    Yale Univ

  Authors

  • Wei-Hsiang Lin

    Yale Univ

  • Edo Kussell

    Center of Genomic and Systems Biology, New York University

  • Christine Jacobs-Wagner

    Yale Univ

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• Temporal precision of molecular events with regulation and feedback

  ORAL

  March 6, 2019, 3:18 PM – March 6, 2019, 3:30 PM

  Presenters

  • Shivam Gupta

    Purdue University

  Authors

  • Shivam Gupta

    Purdue University

  • Sean Fancher

    Purdue University

  • Hendrik Korswagen

    Hubrecht Institute

  • Andrew Mugler

    Purdue University, Department of Physics and Astronomy, Purdue University, West Lafayette, Indiana 47907, USA

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• Fluid effects in spatial gradient sensing

  ORAL

  March 6, 2019, 3:30 PM – March 6, 2019, 3:42 PM

  Presenters

  • Nicholas Licata

    University of Michigan - Dearborn

  Authors

  • Nicholas Licata

    University of Michigan - Dearborn

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• From structural to temporal and spatial hierarchies in heteroclinic networks

  ORAL

  March 6, 2019, 3:42 PM – March 6, 2019, 3:54 PM

  Presenters

  • Hildegard Meyer-Ortmanns

    Physics and Earth Sciences, Jacobs University Bremen gGmbH, Jacobs University Bremen, Jacobs University Bremen, Germany

  Authors

  • Hildegard Meyer-Ortmanns

    Physics and Earth Sciences, Jacobs University Bremen gGmbH, Jacobs University Bremen, Jacobs University Bremen, Germany

  • Maximilian Voit

    Jacobs University Bremen

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• The Mechanosensory Hair Bundles of the Inner Ear Distinguish Sinusoidal Forces from Noise Best When They Oscillate Spontaneously but Remain on the Verge of Quiescence

  ORAL

  March 6, 2019, 3:54 PM – March 6, 2019, 4:06 PM

  Presenters

  • Daibhid O Maoileidigh

    Stanford University

  Authors

  • Daibhid O Maoileidigh

    Stanford University

  • Joshua D Salvi

    Massachusetts General Hospital / McLean Hospital, Harvard University

  • Jim Hudspeth

    Laboratory of Sensory Neuroscience, The Rockefeller University, Howard Hughes Medical Institute, Rockefeller University

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• Trade-off between organelle number and size fluctuations suggest that a limiting pool of building blocks biophysically constrains organelle biogenesis

  ORAL

  March 6, 2019, 4:06 PM – March 6, 2019, 4:18 PM

  Presenters

  • Kiandokht Panjtan Amiri

    Washington University, St. Louis

  Authors

  • Kiandokht Panjtan Amiri

    Washington University, St. Louis

  • Asa Kalish

    Washington University, St. Louis

  • Luke Nadell

    Washington University, St. Louis

  • Shankar Mukherji

    Washington University, St. Louis

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• Consequences of noise in bacterial communication

  ORAL

  March 6, 2019, 4:18 PM – March 6, 2019, 4:30 PM

  Presenters

  • Ghazaleh Ostovar

    University of Southern California

  Authors

  • Ghazaleh Ostovar

    University of Southern California

  • James Boedicker

    University of Southern California

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• Optimal control of aging in complex networks

  ORAL

  March 6, 2019, 4:30 PM – March 6, 2019, 4:42 PM

  Presenters

  • Eric Sun

    Harvard University

  Authors

  • Eric Sun

    Harvard University

  • Thomas Michaels

    Harvard University, Engineering and Applied Sciences, Harvard

  • L Mahadevan

    Harvard University, SEAS, Harvard University, Paulson School of Engineering and Applied Sciences, Harvard University, Engineering and Applied Sciences, Harvard, John A. Paulson School Of Engineering And Applied Sciences, Harvard University, SEAS, Harvard, SEAS, Physics, OEB, Harvard University

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• Integrating epigenetics to construct gene regulatory networks

  ORAL

  March 6, 2019, 4:42 PM – March 6, 2019, 4:54 PM

  Presenters

  • Abhijeet Sonawane

    Medicine, Harvard Medical School

  Authors

  • Abhijeet Sonawane

    Medicine, Harvard Medical School

  • Kimberly Renee Glass

    Medicine, Harvard Medical School

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• Kinetic PDE models of cell size control: size blow-up and evolution of growth rate

  ORAL

  March 6, 2019, 4:54 PM – March 6, 2019, 5:06 PM

  Presenters

  • Thomas Chou

    Mathematics, UCLA

  Authors

  • Mingtao Xia

    Mathematics, Peking University

  • Thomas Chou

    Mathematics, UCLA

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• Exploiting a Percolation Transition for the Clustering of Noisy Gene Expression Data

  ORAL

  March 6, 2019, 5:06 PM – March 6, 2019, 5:18 PM

  Presenters

  • Steffen Werner

    AMOLF

  Authors

  • Steffen Werner

    AMOLF

  • Tom S Shimizu

    AMOLF, Deparment of Living Matter, AMOLF

  • Greg Stephens

    Physics, Vrije Universiteit & OIST Graduate University, Physics, Vrije Univ (Free Univ) Amsterdam, Vrije Universiteit (Amsterdam) & OIST Graduate University (Okinawa), Vrije Universiteit

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• Dynamical network formation of <i>C. elegans</i>

  ORAL

  March 6, 2019, 5:18 PM – March 6, 2019, 5:30 PM

  Presenters

  • Ken Nagai

    School of Materials Scienc, Japan Advanced Institute of Science and Technology

  Authors

  • Ken Nagai

    School of Materials Scienc, Japan Advanced Institute of Science and Technology

  • Hiroshi Ito

    Faculty of Design, Kyushu University

  • Takuma Sugi

    Molecular Neuroscience Research Center, Shiga University of Medical Science

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