Intrinsically Disordered Proteins

Presentations

• Incorporating local secondary structure information into coarse-grained simulations of IDPs

  ORAL · Invited

  March 4, 2024, 12:30 PM – March 4, 2024, 1:06 PM

  Presenters

  • Robert B Best

    Univ of Cambridge

  Authors

  • Robert B Best

    Univ of Cambridge

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• All at the surface: Exploring the surface thermodynamics of polymer clusters through minimal molecular modelling

  ORAL

  March 4, 2024, 1:06 PM – March 4, 2024, 1:18 PM

  Presenters

  • Luke K Davis

    University College London

  Authors

  • Luke K Davis

    University College London

  • Philip Pearce

    University College London

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• ABSTRACT WITHDRAWN

  COFFEE_KLATCH

  March 4, 2024, 1:18 PM – March 4, 2024, 1:30 PM

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• Fine Structures of Intrinsically Disordered Proteins

  ORAL

  March 4, 2024, 1:30 PM – March 4, 2024, 1:42 PM

  Publication: Swarnadeep Seth, Brandon Stine, and Aniket Bhattacharya, "Fine structures of Intrinsically Disordered Proteins" (2023), ArXiv: https://doi.org/10.48550/arXiv.2307.16383

  Presenters

  • Aniket Bhattacharya

    University of Central Florida

  Authors

  • Aniket Bhattacharya

    University of Central Florida

  • Brandon Stine

    University of Central Florida

  • Swarnadeep Seth

    University of Central Florida

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• Conformational ensembles of the human intrinsically disordered proteome

  ORAL · Invited

  March 4, 2024, 1:42 PM – March 4, 2024, 2:18 PM

  Publication: Giulio Tesei, Thea K. Schulze, Ramon Crehuet, and Kresten Lindorff-Larsen. Accurate model of liquid–liquid phase behavior of intrinsically disordered proteins from optimization of single-chain properties. Proceedings of the National Academy of Sciences, 118(44), 2021. doi:10.1073/pnas.2111696118.
  
  Giulio Tesei and Kresten Lindorff-Larsen. Improved predictions of phase behaviour of intrinsically disordered proteins by tuning the interaction range [version 2; peer review: 2 approved]. Open Research Europe, 2:94, 2023. doi:10.12688/openreseurope.14967.2.
  
  Giulio Tesei, Anna Ida Trolle, Nicolas Jonsson, Johannes Betz, Frederik E. Knudsen, Francesco Pesce, Kristoffer E. Johansson, and Kresten Lindorff-Larsen. Conformational ensembles of the human intrinsically disordered proteome: Bridging chain compaction with function and sequence conservation. bioRxiv, 2023. doi:10.1101/2023.05.08.539815.

  Presenters

  • Giulio Tesei

    University of Copenhagen

  Authors

  • Giulio Tesei

    University of Copenhagen

  • Anna Ida Trolle

    University of Copenhagen

  • Nicolas Jonsson

    University of Copenhagen

  • Johannes Betz

    University of Copenhagen

  • Frederik E Knudsen

    University of Copenhagen

  • Francesco Pesce

    University of Copenhagen

  • Kristoffer E Johansson

    University of Copenhagen

  • Kresten Lindorff-Larsen

    University of Copenhagen

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• Accelerating Missense Mutation Identification in Intrinsically Disordered Proteins using Deep Learning

  ORAL

  March 4, 2024, 2:18 PM – March 4, 2024, 2:30 PM

  Publication: Swarnadeep Seth, Brandon Stine, and Aniket Bhattacharya, "Fine structures of Intrinsically Disordered Proteins" (2023), ArXiv: https://doi.org/10.48550/arXiv.2307.16383

  Presenters

  • Swarnadeep Seth

    University of Central Florida

  Authors

  • Swarnadeep Seth

    University of Central Florida

  • Aniket Bhattacharya

    University of Central Florida

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• Comparison of results from different coarse-grained models of Intrinsically Disordered Proteins

  ORAL

  March 4, 2024, 2:30 PM – March 4, 2024, 2:42 PM

  Presenters

  • Brandon Stine

    University of Central Florida

  Authors

  • Brandon Stine

    University of Central Florida

  • Swarnadeep Seth

    University of Central Florida

  • Aniket Bhattacharya

    University of Central Florida

  View abstract →

• Abstract Withdrawn

  ORAL Withdrawn

  March 4, 2024, 2:42 PM – March 4, 2024, 2:54 PM

  View abstract →

• Minimum dissipation approximation: A fast algorithm for the prediction of diffusive properties of intrinsically disordered proteins

  ORAL

  March 4, 2024, 2:54 PM – March 4, 2024, 3:06 PM

  Presenters

  • Maciej Lisicki

    University of Warsaw

  Authors

  • Maciej Lisicki

    University of Warsaw

  • Radost Waszkiewicz

    University of Warsaw

  • Agnieszka Michas

    Institute of Physics, Polish Academy of Sciences

  • Michal K Bialobrzewski

    Institute of Physics, Polish Academy of Sciences

  • Barbara Klepka

    Institute of Physics, Polish Academy of Sciences

  • Maja Cieplak-Rotowska

    Institute of Physics, Polish Academy of Sciences

  • Zuzanna Staszalek

    Institute of Physics, Polish Academy of Sciences

  • Bogdan Cichocki

    University of Warsaw

  • Anna Niedzwiecka

    Institute of Physics, Polish Academy of Sciences

  • Piotr Szymczak

    University of Warsaw

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• The Effects of Ionic Strength on the Morphology, Scattering, and Mechanical Response of Neurofilament-derived Protein Brushes

  ORAL

  March 4, 2024, 3:06 PM – March 4, 2024, 3:18 PM

  Publication: https://doi.org/10.48550/arXiv.2310.02463

  Presenters

  • Takashi Yokokura

    University of California, Berkeley

  Authors

  • Takashi Yokokura

    University of California, Berkeley

  • Chao Duan

    University of California, Berkeley

  • Erika A Ding

    Berkeley

  • Sanjay Kumar

    Berkeley

  • Rui Wang

    University of California, Berkeley

  View abstract →