Data science, AI and ML for Active and Living Systems

Presentations

• Controlling Colloidal Assembly & Reconfiguration

  ORAL · Invited

  March 5, 2024, 9:00 AM – March 5, 2024, 9:36 AM

  Presenters

  • Michael A Bevan

    Johns Hopkins University

  Authors

  • Michael A Bevan

    Johns Hopkins University

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• Quantifying dynamics of soft and active matter with microscopy and machine learning

  ORAL

  March 5, 2024, 9:36 AM – March 5, 2024, 9:48 AM

  Presenters

  • Gildardo Martinez

    University of San Diego

  Authors

  • Gildardo Martinez

    University of San Diego

  • Justin Siu

    University of San Diego

  • Dylan Gage

    University of San Diego

  • Emma Kao

    University of San Diego

  • Juan Carlos Avila

    University of San Diego

  • Ruilin You

    University of San Diego

  • Ryan J McGorty

    University of San Deigo, University of San Diego

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• Learning active nematohydrodynamics with SINDy-PI

  ORAL

  March 5, 2024, 9:48 AM – March 5, 2024, 10:00 AM

  Presenters

  • Chris Amey

    Brandeis University

  Authors

  • Chris Amey

    Brandeis University

  • Michael F Hagan

    Brandeis University

  • Aparna Baskaran

    Brandeis University

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• Grant Rotskoff

  ORAL · Invited

  March 5, 2024, 10:00 AM – March 5, 2024, 10:36 AM

  Publication: arXiv:2306.10778, arxiv:2205.01205

  Presenters

  • Grant M Rotskoff

    Stanford University, Stanford Univ

  Authors

  • Grant M Rotskoff

    Stanford University, Stanford Univ

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• Learning cell division strategies across diverse organisms

  ORAL

  March 5, 2024, 10:36 AM – March 5, 2024, 10:48 AM

  Presenters

  • Shijie Zhang

    Massachusetts Institute of Technology

  Authors

  • Shijie Zhang

    Massachusetts Institute of Technology

  • Chenyi Fei

    Massachusetts Institute of Technology

  • Jorn Dunkel

    Massachusetts Institute of Technology

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• A Spectral Approach for Learning Spatiotemporal Neural Differential Equations

  ORAL

  March 5, 2024, 10:48 AM – March 5, 2024, 11:00 AM

  Publication: https://arxiv.org/pdf/2309.16131.pdf

  Presenters

  • Mingtao Xia

    New York University

  Authors

  • Mingtao Xia

    New York University

  • Xiangting Li

    University of California, Los Angeles

  • Qijing Shen

    Oxford University

  • Tom Chou

    University of California, Los Angeles

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• Controlling Assembly and Encoding in Active Matter Using Light Patterns

  ORAL

  March 5, 2024, 11:00 AM – March 5, 2024, 11:12 AM

  Presenters

  • Jerome Delhommelle

    University of Massachusetts, Lowell

  Authors

  • Jerome Delhommelle

    University of Massachusetts, Lowell

  • Caroline Desgranges

    University of Massachusetts Lowell

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• Improved KCNQ2 gene missense variant interpretation with artificial intelligence.

  ORAL

  March 5, 2024, 11:12 AM – March 5, 2024, 11:24 AM

  Publication: Improved KCNQ2 gene missense variant interpretation with artificial intelligence
  Alba Saez-Matia, Arantza Muguruza-Montero, Sara M-Alicante, Eider Núñez, Rafael Ramis, Óscar R. Ballesteros, Markel G Ibarluzea, Carmen Fons, View ORCID ProfileAritz Leonardo, Aitor Bergara, Alvaro Villarroel
  https://doi.org/10.1101/2022.10.20.513007

  Presenters

  • Aritz Leonardo

    University of the Basque Country UPV/EHU

  Authors

  • Aritz Leonardo

    University of the Basque Country UPV/EHU

  • Aitor Bergara

    Donostia International Physics Center

  • Alvaro Villarroel

    Biofisika institute

  • Markel García Ibarluzea

    Donostia International Physcis Center

  • Rafael Ramis Cortés

    Donostia International Physcis Center

  • Alba Sáez-Matía

    biofisika

  • Eider Núñez

    Biofisika institute

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• Uncovering interpretable low-dimensional geometric structures in gene expression using curvature regularized variational autoencoders

  ORAL

  March 5, 2024, 11:24 AM – March 5, 2024, 11:36 AM

  Presenters

  • Jason Z Kim

    Cornell University

  Authors

  • Jason Z Kim

    Cornell University

  • Nicolas Perrin-Gilbert

    Curie Institute

  • Paul Klein

    Curie Institute

  • Erkan Narmanli

    Curie Institute

  • Chris Myers

    Cornell University

  • Itai Cohen

    Cornell University

  • Joshua J Waterfall

    Curie Institute

  • James P Sethna

    Cornell University

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• Convolutional Neural Network Analysis of Molecular Docking for Cancer Drug Discovery

  ORAL

  March 5, 2024, 11:36 AM – March 5, 2024, 11:48 AM

  Presenters

  • Gaige Riggs

    Missouri State University

  Authors

  • Gaige Riggs

    Missouri State University

  • Ridwan Sakidja

    Missouri State University

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• Combining Neural Networks and Principal Component Analysis

  ORAL

  March 5, 2024, 11:48 AM – March 5, 2024, 12:00 PM

  Publication: D. Yevick, K. Suszek, in preparation (Arxiv)

  Presenters

  • Karolina Suszek

    University of Waterloo

  Authors

  • David O Yevick

    University of Waterloo

  • Karolina Suszek

    University of Waterloo

  View abstract →