Physical phase field model for phagocytosis
ORAL
Abstract
We propose and study a simple, physical model for phagocytosis, i.e. the active, actin-mediated uptake of micron-sized particles by biological cells. The cell is described by the phase field method and the driving mechanisms of uptake are actin ratcheting, modeled by a dynamic vector field, as well as cell-particle adhesion due to receptor-ligand binding. We first test the modeling framework for the symmetric situation of a spherical cell engulfing a fixed spherical particle. We then exemplify its versatility by studying various asymmetric situations like different particle shapes and orientations, as well as the simultaneous uptake of two particles. In addition, we perform a perturbation theory of a slightly modified model version in the symmetric setting, allowing to derive a reduced model, shedding light on the effective driving forces and being easier to solve. This work is meant as a first step in describing phagocytosis and we discuss several effects that are amenable to future modeling within the same framework.
* For their valuable support in providing computational resources, we would like to thank PTB Berlin.
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Publication: B. Winkler, M. A. Hamed, A. A. Nepomnyashchy, F. Ziebert; "Physical phase field model for phagocytosis" - arXiv, 2023
Presenters
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Benjamin Winkler
Physikalisch-Technische Bundesanstalt
Authors
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Benjamin Winkler
Physikalisch-Technische Bundesanstalt
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Falko Ziebert
Institute for Theoretical Physics, Heidelberg University
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Mohammad A Hamed
Department of Mathematics, Technion - Israel Institute of Technology
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Alexander A Nepomnyashchy
Department of Mathematics, Technion - Israel Institute of Technology