Impact of crowding on the diversity of expanding populations

ORAL

Abstract

Growing cell populations become densely packed as cells proliferate and fill space. Crowding prevents spatial mixing of individuals, significantly altering the evolutionary outcome from established results for well-mixed populations. Despite the fundamental differences between spatial and well-mixed populations, little is known about the impact of crowding on genetic diversity. With microbial colonies on plates, we show that the allele frequency spectrum is characterized by a power law for low frequencies. Using cell-based simulations and microfluidic experiments, we identify the origin of this distribution in the volume-exclusion interactions within the crowded cellular environment, enabling us to extend these findings to a broad range of dense populations. This study highlights the importance of cellular crowding for the emergence of rare genetic variants.

Publication: Schreck, C. F. et al. Impact of crowding on the diversity of expanding populations. Proc. Natl Acad. Sci. USA 120, e2208361120 (2023)

Presenters

  • Carl Schwendinger-Schreck

    Children's Mercy Research Institute, Children's Mercy

Authors

  • Carl Schwendinger-Schreck

    Children's Mercy Research Institute, Children's Mercy

  • Oskar Hallatschek

    University of California, Berkeley

  • Marie-Cecilia Duvernoy

    University of California, Berkeley

  • Jona Kayser

    Max Planck Institute for the Science of Light, Max-Planck-Zentrum für Physik und Medizin, Erlangen 91058, Germany

  • Jona Kayser

    Max Planck Institute for the Science of Light, Max-Planck-Zentrum für Physik und Medizin, Erlangen 91058, Germany

  • Stephen Martis

    Memorial Sloan Kettering Cancer Center

  • Yuya Karita

    Max Planck Institute for Evolutionary Biology

  • Diana Fusco

    Univ of Cambridge