DNA Mechanics and Gene Expression
FOCUS · W38 · ID: 2154481
Presentations
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Prof. Yann Chemla (University of Illinois Urbana-Champaign)
ORAL · Invited
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Presenters
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Yann R Chemla
University of Illinois at Urbana-Champaign
Authors
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Yann R Chemla
University of Illinois at Urbana-Champaign
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Probing the anisotropic bendability of double-stranded DNA
ORAL
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Presenters
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Harold D Kim
Georgia Institute of Technology
Authors
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Harold D Kim
Georgia Institute of Technology
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Michael L Ryan
Georgia Institute of Technology
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The surprising ways in which macromolecular crowders affect DNA structure and topology
ORAL
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Publication: Jin Qian, Zachary Zinzan Montgomery, Wenxuan Xu, Andrew Spakowitz, David Dunlap and Laura Finzi, "Macromolecular crowders: influencers of DNA structure and topology", planned.
Presenters
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Laura Finzi
Emory University
Authors
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Laura Finzi
Emory University
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David D Dunlap
Emory University
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Jin Qian
Emory University
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Zachary Z Montgomery
Stanford University
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Andrew Spakowitz
Stanford University
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Controlling gene expression timing through gene regulatory architecture
ORAL
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Publication: Ali MZ, Brewster RC (2022) Controlling gene expression timing through gene regulatory architecture. PLOS Computational Biology 18(1): e1009745. https://doi.org/10.1371/journal.pcbi.1009745
Presenters
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MD ZULFIKAR ALI
University of Southern Indiana
Authors
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MD ZULFIKAR ALI
University of Southern Indiana
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Robert C Brewster
University of Massachusetts Medical School
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Maximum entropy models for patterns of gene expression
ORAL
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Presenters
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Camilla Sarra
Princeton University
Authors
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Camilla Sarra
Princeton University
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William S Bialek
Princeton University
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Prof. Sua Myong (Johns Hopkins University)
ORAL · Invited
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Presenters
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Sua Myong
Johns Hopkins University
Authors
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Sua Myong
Johns Hopkins University
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Supercoiling-mediated feedback rapidly couples and tunes transcription in mammalian cells
ORAL
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Publication: C. P. Johnstone and K. E. Galloway, Supercoiling-Mediated Feedback Rapidly Couples and Tunes Transcription, Cell Reports 41, (2022).
Presenters
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Christopher Johnstone
Massachusetts Institute of Technology
Authors
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Christopher Johnstone
Massachusetts Institute of Technology
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Kate Galloway
Massachusetts Institute of Technology
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Regulation of chromatin transcription via DNA supercoiling
ORAL
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Presenters
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Sumitabha Brahmachari
Rice University
Authors
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Sumitabha Brahmachari
Rice University
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Shubham Tripathi
Yale University
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Jose N Onuchic
Rice University
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Herbert Levine
Northeastern University
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Stochastic nucleosome disassembly mediated by remodelers and histone fragmentation
ORAL
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Publication: preprint by the same title at arXiv:2309.02736 [q-bio.BM]
Presenters
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Xiangting Li
University of California, Los Angeles
Authors
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Xiangting Li
University of California, Los Angeles
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Tom Chou
University of California, Los Angeles
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AMPK regulates chromatin dynamics and structure through LaminA
ORAL
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Presenters
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Fadil Iqbal
Indiana University - Purdue University Indianapolis
Authors
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Fadil Iqbal
Indiana University - Purdue University Indianapolis
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Modeling the Origin of Long-Range Correlation of DNA Methylation in Chromosomal DNA
ORAL
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Presenters
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Ariana Tse
Stanford University
Authors
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Ariana Tse
Stanford University
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Andrew Spakowitz
Stanford University
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