Physics of Learning and Adaptation in Living Systems

Presentations

• Traveling-wave strategy for plant-mycorrhizal trade

  ORAL · Invited

  March 8, 2024, 9:00 AM – March 8, 2024, 9:36 AM

  Presenters

  • Thomas Shimizu

    AMOLF

  Authors

  • Thomas Shimizu

    AMOLF

  • Loreto Oyarte Galvez

    Vrije Universiteit & AMOLF, Amsterdam

  • Corentin Bisot

    AMOLF & ENS Lyon

  • Philippe Bourriane

    Princeton University & ESPCI

  • Howard A Stone

    Princeton University

  • E. Toby Kiers

    Vrije Universiteit Amsterdam

  View abstract →

• Physical learning in dynamical systems

  ORAL

  March 8, 2024, 9:36 AM – March 8, 2024, 9:48 AM

  Presenters

  • Menachem Stern

    University of Pennsylvania

  Authors

  • Menachem Stern

    University of Pennsylvania

  • Andrea J Liu

    University of Pennsylvania

  • Vijay Balasubramanian

    University of Pennsylvania

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• Waddington differentiation and saddle bifurcation in generalized Hopfield networks

  ORAL

  March 8, 2024, 9:48 AM – March 8, 2024, 10:00 AM

  Publication: Waddington differentiation and saddle bifurcation for prototype learning

  Presenters

  • Nacer Eddine Boukacem

    Universite de Montreal

  Authors

  • Nacer Eddine Boukacem

    Universite de Montreal

  • Allen Leary

    Regeneron

  • Paul Francois

    Universite de Montreal, Université de Montréal

  • Madhav Mani

    Northwestern University

  • Felix Gottlieb

    McGill University

  • Robin Thériault

    Scuola Normale Superiore di Pisa

  View abstract →

• The Restricted Kirchhoff Machine: self-learning electrical circuits for unsupervised learning

  ORAL

  March 8, 2024, 10:00 AM – March 8, 2024, 10:12 AM

  Presenters

  • Marcelo Guzmán

    University of Pennsylvania, UPenn

  Authors

  • Marcelo Guzmán

    University of Pennsylvania, UPenn

  • Simone Ciarella

    Netherlands eScience Center

  • Andrea J Liu

    University of Pennsylvania

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• Adaptation and Loop Stabilization in Periodically Driven Elastic Flow Networks

  ORAL

  March 8, 2024, 10:12 AM – March 8, 2024, 10:24 AM

  Presenters

  • Purba Chatterjee

    University of Pennsylvania

  Authors

  • Purba Chatterjee

    University of Pennsylvania

  • Sean Fancher

    University of Pennsylvania,University of Michigan

  • Eleni Katifori

    University of Pennsylvania

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• Adaptation maximizes information and minimizes dissipation across biological scales

  ORAL

  March 8, 2024, 10:24 AM – March 8, 2024, 10:36 AM

  Publication: G. Nicoletti, D.M. Busiello, Physical Review Letters 127, 228301 (2021)
  G. Nicoletti, M. Bruzzone, S. Suweis, M. Dal Maschio, D.M. Busiello, arXiv.2301.12812 (2023)

  Presenters

  • Daniel Maria Busiello

    Max Planck Institute for the Physics of Complex Systems

  Authors

  • Daniel Maria Busiello

    Max Planck Institute for the Physics of Complex Systems

  • Giorgio Nicoletti

    University of Padua

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• Adaptation, fluctuating landscapes and heavy-tails in animal behavior

  ORAL

  March 8, 2024, 10:36 AM – March 8, 2024, 10:48 AM

  Presenters

  • Antonio Carlos Costa

    University of Sorbonne, Paris Brain Institute (ICM)

  Authors

  • Antonio Carlos Costa

    University of Sorbonne, Paris Brain Institute (ICM)

  • Massimo Vergassola

    CNRS

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• Nonlinear dynamics of habituating systems: learning to ignore

  ORAL

  March 8, 2024, 10:48 AM – March 8, 2024, 11:00 AM

  Presenters

  • Matthew Smart

    Flatiron Institute

  Authors

  • Matthew Smart

    Flatiron Institute

  • Stanislav Y Shvartsman

    Princeton University

  • Martin Mönnigmann

    Ruhr-Universität Bochum

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• Predicting Cellular Regulation from Natural Selection, Thermodynamics and Control Theory

  ORAL

  March 8, 2024, 11:00 AM – March 8, 2024, 11:12 AM

  Publication: Britton, S., Alber, M, and Cannon, W. R., Enzyme Activities Predicted by Metabolite Concentrations and Solvent Capacity in the Cell, Journal of The Royal Society Interface (2020), 17(171): 20200656, doi: https:// doi:10.1098/rsif.2020.0656
  
  King, Ethan, Holzer, Jesse, North, Justin A., and Cannon, William R., An approach to learn regulation to maximize growth and entropy production rates in metabolism, Frontiers in Systems Biology, Vol. 3, 2023, DOI: 10.3389/fsysb.2023.981866
  

  Presenters

  • William R Cannon

    Pacific Northwest Natl Lab

  Authors

  • William R Cannon

    Pacific Northwest Natl Lab

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• Discovering plasticity rules that organize and maintain neural circuits

  ORAL

  March 8, 2024, 11:12 AM – March 8, 2024, 11:24 AM

  Presenters

  • David Bell

    University of Washington

  Authors

  • David Bell

    University of Washington

  • Alison Duffy

    University of Washington

  • Adrienne Fairhall

    University of Washington

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• Modeling stochastic phenotypic adaptation to predict enzalutamide resistance in prostate cancer

  ORAL

  March 8, 2024, 11:24 AM – March 8, 2024, 11:36 AM

  Publication: George. Optimal phenotypic adaptation in fluctuating environments. Accepted. Biophysical Journal.

  Presenters

  • Zahra S Ghoreyshi

    Texas A&M University

  Authors

  • Zahra S Ghoreyshi

    Texas A&M University

  • Shibjyoti Debnath

    Duke University

  • Jason Somarelli

    Duke University

  • Jason T George

    Texas A&M University

  View abstract →

• Generalized end-product feedback circuit senses high dimensional environmental fluctuations

  ORAL

  March 8, 2024, 11:36 AM – March 8, 2024, 11:48 AM

  Publication: F Yu, M Tikhonov. Generalized end-product feedback circuit senses high dimensional environmental fluctuations. Preprint on arXiv.

  Presenters

  • Fang Yu

    Washington University, St. Louis

  Authors

  • Fang Yu

    Washington University, St. Louis

  • Mikhail Tikhonov

    Washington University, St. Louis

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• A fractional calculus model of bacterial adaptation to fluctuating environments

  ORAL

  March 8, 2024, 11:48 AM – March 8, 2024, 12:00 PM

  Presenters

  • Josiah Kratz

    Carnegie Mellon University

  Authors

  • Josiah Kratz

    Carnegie Mellon University

  • Shiladitya Banerjee

    Carnegie Mellon University

  View abstract →