Chirality across scales in tissue dynamics

ORAL

Abstract

Chiral processes that lack mirror symmetry pervade nature from enantioselective molecular interactions to the asymmetric development of organisms. An outstanding challenge at the interface between physics and biology consists in bridging the multiple scales between microscopic and macroscopic chirality. Here, we combine theory, experiments and modern inference algorithms to study a paradigmatic example of dynamic chirality transfer across scales: the generation of tissue-scale flows from subcellular forces. The distinctive properties of our microscopic graph model and the corresponding coarse-grained viscoelasticity are that (i) net cell proliferation is spatially inhomogeneous and (ii) cellular dynamics cannot be expressed as an energy gradient. To overcome the general challenge of inferring microscopic model parameters from noisy high-dimensional data, we develop a nudged automatic differentiation algorithm (NADA) that can handle large fluctuations in cell positions observed in single tissue snapshots. This data-calibrated microscopic model quantitatively captures proliferation-driven tissue flows observed at large scales in our experiments on fibroblastoma cell cultures. Beyond chirality, our inference algorithm can be used to extract interpretable graph models from limited amounts of noisy data of living and inanimate cellular systems such as networks of convection cells and flowing foams.

*The BiPMS group is a member of the Institut Pierre-Gilles de Gennes and has benefited from the technical contributions of the joint service unit Unité d'Appui et de Recherche 3750 of the French National Centre for Scientific Research. The BiPMS group is a member of the LabEx Cell(n) Scale (Grant Nos. ANR-11-LABX-0038 and ANR-10-IDEX0001-02). We gratefully acknowledge funding from the Canceropôle Ile-de-France and the French National Cancer Institute. The research was supported by The Israel Science Foundation (grants no. 838/23, 2044/23). S.C. and M.F. acknowledge a Kadanoff–Rice fellowship funded by the National Science Foundation under award no. DMR-2011854. D.E.G acknowledges support by the NSF-Simons National Institute for Theory and Mathematics in Biology (NITMB) Fellowship supported via grants from the NSF (DMS-2235451) and Simons Foundation (MPS-NITMB-00005320). M.F. acknowledges partial support from the National Science Foundation under grant DMR-2118415 and the Simons Foundation. V.V. acknowledges partial support from the Army Research Office under grant W911NF-22-2-0109 and W911NF-23-1-0212. M.F. and V.V acknowledge partial support from the France Chicago center through a FACCTS grant. This research was partly supported from the National Science Foundation through the Center for Living Systems (grant no. 2317138), the National Institute for Theory and Mathematics in Biology, the Simons Foundation and the Chan Zuckerberg Foundation. This work was completed in part w

Publication: arXiv:2506.12276

Presenters

  • Sihan Chen

    • University of Chicago

Authors

  • Sihan Chen

    • University of Chicago
  • Doruk Gökmen

    • University of Chicago
  • Michel Fruchart

    • CNRS
  • Miriam Krumbein

    • Ben-Gurion University of the Negev
  • pascal silberzan

    • Institut Curie / CNRS
  • Victor Yashunsky

    • Ben-Gurion University of the Negev - Welcome!
  • vincenzo vitelli

    • University of Chicago
    • U Chicago