Spatial patterning through coupled phase separation and reaction diffusion processes

Oral-In-person

Abstract

Control and regulation of protein assemblies across space and time are critical for function in cells and tissues. Important examples include morphogen gradients in developing embryos and bio-condensates like stress granules, which are responsible for rapid response to external stressors. Chemical activity is typically the non-equilibrium driving force in producing well-regulated spatial patterns. In this work, we couple chemical driving, through a reaction-diffusion model, to the simplest paradigm for assembly: a phase-separating scalar field. We aim to study the effects of such reaction-diffusion systems, which show Turing patterns, on the phase-separation behaviour of a condensate. We model the condensate with standard Model-B dynamics and couple it to the Brusselator reaction-diffusion system, which shows a variety of static patterns, including spots and stripes. We find that for a weak coupling strength, phase-separation can be arrested, leading to multiple stable droplets at steady state. Upon further increasing the coupling strength, the system exhibits a secondary instability and develops patterns within the dense region of the condensate, leading to superlattices and higher-order structures. Our work provides an alternative mechanism by which proteins in biological systems might adaptively organize across multiple length scales.

Presenters

  • Chitrak Bhowmik

    • Brandeis University

Authors

  • Chitrak Bhowmik

    • Brandeis University
  • Robert Jack

  • Michael Hagan

    • Brandeis University
  • Aparna Baskaran

    • Brandeis University