Diffusiophoresis promotes phase separation and transport of biomolecular condensates

ORAL

Abstract

The internal microenvironment of a living cell is heterogeneous and comprises a multitude of organelles with distinct biochemistry. Amongst them are biomolecular condensates, which are membrane-less, phase-separated compartments enriched in system-specific proteins and nucleic acids. The heterogeneity of the cell engenders the presence of multiple spatiotemporal gradients in chemistry, charge, concentration, temperature, and pressure. Such thermodynamic gradients can lead to non-equilibrium driving forces for the formation and transport of biomolecular condensates. Here, we report how ion gradients impact the transport processes of biomolecular condensates on the mesoscale and biomolecules on the microscale. Utilizing a microfluidic platform, we demonstrate that the presence of ion concentration gradients can accelerate the transport of biomolecules, including nucleic acids and proteins, via diffusiophoresis. This hydrodynamic transport process allows localized enrichment of biomolecules, thereby promoting the location-specific formation of biomolecular condensates via phase separation. The ion gradients further impart active motility of condensates, allowing them to exhibit enhanced diffusion along the gradient. Coupled with reentrant phase behavior, the gradient-induced active motility leads to a dynamical redistribution of condensates that ultimately extends their lifetime. Together, our results demonstrate diffusiophoresis as a non-equilibrium thermodynamic force that governs the formation and active transport of biomolecular condensates.

* This work was supported by grants from the National Science Foundation (2223737 and 2237177 to S.S.) and the National Institute of General Medical Sciences of the National Institutes of Health (R35 GM138186 to P.R.B.).

Publication: Diffusiophoresis promotes phase separation and transport of biomolecular condensates.
Viet Sang Doan, Ibraheem Alshareedah, Anurag Singh, Priya R. Banerjee, Sangwoo Shin
bioRxiv 2023.07.03.547532; doi: https://doi.org/10.1101/2023.07.03.547532

Presenters

  • Sangwoo Shin

    University at Buffalo, The State University of New York

Authors

  • Viet Sang Doan

    University at Buffalo, The State University of New York

  • Ibraheem Alshareedah

    State Univ of NY - Buffalo

  • Anurag Singh

    University at Buffalo, The State University of New York, State University of New York at Buffalo, Department of Physics

  • Priya R Banerjee

    State Univ of NY - Buffalo, State University of New York at Buffalo, Department of Physics

  • Sangwoo Shin

    University at Buffalo, The State University of New York