Physics of Learning and Adaptation II
FOCUS · MAR-M58 · ID: MAR-M58
Presentations
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When is "just right" also "much more than enough"? Surprising lessons on optimality from a bacterium
Invited-In-person · Invited
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Publication: Teresa W Lo, H James Choi, Dean Huang, and Paul A Wiggins. Noise robustness and metabolic load determine the principles of central dogma regulation. Sci Adv, 10(34):eado3095, Aug 2024.
H James Choi, Teresa W Lo, Kevin J Cutler, Dean Huang, W Ryan Will, and Paul A Wiggins. Protein overabundance is driven by growth robustness. bioRxiv (Under review at Sci Adv).Presenters
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Paul Wiggins
- University of Washington
Authors
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Paul Wiggins
- University of Washington
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James Choi
- University of Washington
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Teresa Lo
- University of Washington
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Kevin Cutler
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Dean Huang
- University of Washington
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Ryan Will
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Mechanochemical model for Adaptive Motility in E.coli via Peptidoglycan network training
Oral-In-person
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Presenters
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Nada Elmeligy
- Syracuse University
Authors
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Nada Elmeligy
- Syracuse University
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Jennifer Schwarz
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Training elastic network models to change conformation
Oral-In-person
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Publication: [1] Haliloglu, T., Bahar, I. & Erman, B. (1997). Gaussian dynamics of folded proteins. Physical Review Letters, 79(16)
[2] Stern, M., Guzman, M., Martins, F., Liu, A. J., &; Balasubramanian, V. (2025). Physical Networks become what they learn. Physical Review Letters, 134(14).
[3] Guzman, M., Martins, F., Stern, M., & Liu, A. J. (2025). Microscopic imprints of Learned Solutions in tunable networks. Physical Review X, 15(3)Presenters
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Felipe Martins
- University of Pennsylvania
Authors
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Felipe Martins
- University of Pennsylvania
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Marcelo Guzmán
- University of Pennsylvania
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Andrea Liu
- University of Pennsylvania
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Multi-State Allosteric Behavior in Tuned Thermal Mechanical Networks
Oral-In-person
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Presenters
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Yue Shang
- University of Pennsylvania
Authors
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Yue Shang
- University of Pennsylvania
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Adam Frim
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Andrea Liu
- University of Pennsylvania
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Sidney Nagel
- University of Chicago
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Training Stress Patterns in 3D Cellular Packings
Oral-In-person
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Publication: Training Stress Patterns in 3D Cellular Packings; Shabeeb Ameen, Tao Zhang, J.M. Schwarz (in preparation)
Presenters
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Shabeeb Ameen
- Syracuse University
Authors
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Shabeeb Ameen
- Syracuse University
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Tao Zhang
- Shanghai Jiao Tong Univ
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Jennifer Schwarz
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Stable memories maintained by local rules require non-local correlations
Oral-In-person
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Presenters
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Serena Debesai
- University of Chicago
Authors
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Serena Debesai
- University of Chicago
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Martin Falk
- University of Chicago
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Arvind Murugan
- University of Chicago
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Fluctuating environments reveal principles of rapid structural adaptability
Oral-In-person
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Presenters
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Martin Falk
- University of Chicago
Authors
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Martin Falk
- University of Chicago
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Christopher Russo
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Sean Quigley
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Arvind Murugan
- University of Chicago
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Compression-Induced Giant Vortex in a Human Breast Epithelial Spheroid
Oral-In-person · Withdrawn
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Presenters
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Young Joon Suh
- Cornell University
Authors
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Young Joon Suh
- Cornell University
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Manli Liu
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Liyang Wang
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Caleb Takiguchi
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Yukun Sun
- Cornell University
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Jeffrey Segall
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Nikolaos Bouklas
- Cornell University
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Jennifer Schwarz
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Chris Roh
- Cornell University
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Tao Zhang
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Mingming Wu
- Cornell University
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Origin of Resource-Induced Phase Transitions in Biological Information Processing
Oral-In-person
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Presenters
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Takehiro Tottori
- RIKEN Center for Brain Science
Authors
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Takehiro Tottori
- RIKEN Center for Brain Science
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Tetsuya Kobayashi
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Trainable computation in many-to-many molecular networks
Oral-In-person
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Presenters
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Kristina Trifonova
- University of Chicago
Authors
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Kristina Trifonova
- University of Chicago
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Martin Falk
- University of Chicago
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Mason Rouches
- University of Chicago
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Suriyanarayanan Vaikuntanathan
- University of Chicago
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Michael Elowitz
- Caltech
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Arvind Murugan
- University of Chicago
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Differential dynamic microscopy with light field microscopy for quantifying dynamics in 3D
Oral-In-person
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Presenters
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Dylan Gage
- University of San Diego
Authors
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Dylan Gage
- University of San Diego
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Gabriel Ambrose
- University of San Diego
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Gildardo Martinez
- University of San Diego
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Zayda Kellogg
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Ryan McGorty
- University of San Diego
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Disentangling Solvent Nuclear Quantum Effects and Electrostatics in the Carboxylate Vibrational Probe
Oral-In-person
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Presenters
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Mojgan Asadi
- Stanford University
Authors
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Mojgan Asadi
- Stanford University
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Steven Boxer
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Thomas Markland
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