Genome Organization and Subnuclear Phenomena

Presentations

• Forms and Contexts: Pursuing a multi-scale understanding of genome function

  ORAL · Invited

  March 16, 2026, 3:30 PM – March 16, 2026, 4:06 PM

  Presenters

  • Jun Li

    • University of Oklahoma

  Authors

  • Jun Li

    • University of Oklahoma

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• Differential analysis of image-based chromatin tracing data with Dory

  ORAL

  March 16, 2026, 4:06 PM – March 16, 2026, 4:18 PM

  Presenters

  • Chongzhi Zang

    • University of Virginia

  Authors

  • Chongzhi Zang

    • University of Virginia

  • Zhaoxia Ma

    • University of Virginia

  • Miao Liu

    • Yale University

  • Shengyuan Wang

    • University of Virginia

  • Siyuan Wang

    • Yale University

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• Abstract Withdrawn

  ORAL · Withdrawn

  March 16, 2026, 4:18 PM – March 16, 2026, 4:30 PM

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• A Model for de-novo Epigenetic Knock-Outs and the Histone Code

  ORAL

  March 16, 2026, 4:30 PM – March 16, 2026, 4:42 PM

  Presenters

  • Soren Christopher Kyhl

    • University of Chicago

  Authors

  • Soren Christopher Kyhl

    • University of Chicago

  • Juan de Pablo

    • New York University
    • NYU

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• Effect of heterochromatin segregation and peripheral tethering on the rigidity of the cell nucleus.

  ORAL

  March 16, 2026, 4:42 PM – March 16, 2026, 4:54 PM

  Publication: Peripheral heterochromatin tethering is required for chromatin-based nuclear mechanical response, A.G. Attar, J. Paturej, O.S. Sarıyer, E.J. Banigan, A. Erbas, Nucleic Acid Research 53 (15), gkaf763

  Presenters

  • Aykut Erbas

    • Bilkent University

  Authors

  • Aykut Erbas

    • Bilkent University

  • Ali Goktug Attar

    • Bilkent University

  • Edward J Banigan

    • Massachusetts Institute of Technology

  • Ozan S Sarıyer

    • Pîrî Reis University

  • Jaroslaw Paturej

    • University of Silesia
    • Univ of Silesia

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• Engineering Next-Generation Intrabodies for Monitoring the Dynamics of Histone Modification in Living Cells

  ORAL · Invited

  March 16, 2026, 4:54 PM – March 16, 2026, 5:30 PM

  Publication: G. Galindo, D. Maejima, J. DeRoo, S.R. Burlingham, G. Fixen, T. Morisaki, H.P. Febvre, R. Hasbrook, N. Zhao, S. Ghosh, E. Handly Mayton, C.D. Snow, B.J. Geiss, Y. Ohkawa, Y. Sato, H. Kimura, T.J. Stasevich, AI-assisted protein design to rapidly convert antibody sequences to intrabodies targeting diverse peptides and histone modifications, Science Advances 12 (1), eadx8352 (2026).
  https://doi.org/10.1126/sciadv.adx8352

  Presenters

  • Tim Stasevich

    • Colorado State University

  Authors

  • Tim Stasevich

    • Colorado State University

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• Chromatin structure and protein dynamics in transcription condensates at single molecule resolution

  ORAL

  March 16, 2026, 5:30 PM – March 16, 2026, 5:42 PM

  Publication: Chromatin Binding Enriches RNA Polymerase II in Transcription Condensates. A. Budhathoki et al. https://doi.org/10.21203/rs.3.rs-7302634/v1

  Presenters

  • Jan-Hendrik Spille

    • University of Illinois Chicago

  Authors

  • Jan-Hendrik Spille

    • University of Illinois Chicago

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• Active chromatin locus exhibits multimodal viscoelasticity

  ORAL

  March 16, 2026, 5:42 PM – March 16, 2026, 5:54 PM

  Presenters

  • Guang Shi

    • University of Texas at Austin

  Authors

  • Guang Shi

    • University of Texas at Austin

  • Dave Thirumalai

    • University of Texas at Austin

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• Dynamic Interactions at the Chromatin–Nucleolus Interface in Living Cells

  ORAL

  March 16, 2026, 5:54 PM – March 16, 2026, 6:06 PM

  Presenters

  • Yu-Chieh Chung

    • The Ohio State University

  Authors

  • Yu-Chieh Chung

    • The Ohio State University

  • Li-Chun Tu

    • The Ohio State University

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• Spatially correlated motion controls chromosomal locus pair encounter dynamics

  ORAL

  March 16, 2026, 6:06 PM – March 16, 2026, 6:18 PM

  Presenters

  • Janni Harju

    • Princeton University

  Authors

  • Janni Harju

    • Princeton University

  • Pierre Ronceray

    • Aix-Marseille University

  • Thomas Gregor

    • Princeton University

  • David B Brückner

    • University of Basel

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• Kullback-Leibler cluster entropy to quantify local correlation in human genes

  ORAL

  March 16, 2026, 6:18 PM – March 16, 2026, 6:30 PM

  Publication: Ferrero, Renato, Filippo Gandino, and Anna Carbone. "Information theoretic clustering of the human pangenome minigraph." Pattern Recognition Letters 191 (2025): 117-123.
  
  Filippo Gandino, Ferrero, Renato, and Anna Carbone, "Kullback-Leibler cluster entropy: a complexity measure of the 24 complete human chromosomes" submitted to Journal of Physics: Complexity (2025)
  
  Filippo Gandino, Chiara Panico, Renato Ferrero, Mieye Tyrone Ombe, Anna Carbone, "Kullback-Leibler cluster entropy to quantify local correlation in human genes" IEEE Xplore (2025)
  
  Ponta, L., and A. Carbone. "Kullback-Leibler cluster entropy to quantify volatility correlation and risk diversity." Physical Review E 111.1 (2025): 014311.

  Presenters

  • Anna Carbone

    • Politecnico di Torino

  Authors

  • Anna Carbone

    • Politecnico di Torino

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